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  • Currently displaying 41 - 60 of 574 publications
Author(s)
Publication title
Journal Name
Publication year
Benchmarking causal reasoning algorithms for gene expression-based compound mechanism of action analysis
A Bender
BMC bioinformatics
(2023)
24
Deep generative models for 3D molecular structure.
B Baillif, J Cole, P McCabe, A Bender
Curr Opin Struct Biol
(2023)
80
Using Transcriptomics and Cell Morphology Data in Drug Discovery: The Long Road to Practice
L-L Pruteanu, A Bender
ACS medicinal chemistry letters
(2023)
14
Mechanism of action deconvolution of the small-molecule pathological tau aggregation inhibitor Anle138b.
L Hosseini-Gerami, E Ficulle, N Humphryes-Kirilov, DC Airey, J Scherschel, S Kananathan, BJ Eastwood, S Bose, DA Collier, E Laing, D Evans, H Broughton, A Bender
Alzheimer's research & therapy
(2023)
15
Mechanism of action deconvolution of the small-molecule pathological tau aggregation inhibitor Anle138b
L Hosseini-Gerami, E Ficulle, N Humphryes-Kirilov, DC Airey, J Scherschel, S Kananathan, BJ Eastwood, S Bose, DA Collier, E Laing, D Evans, H Broughton, A Bender
Alzheimer's Research & Therapy
(2023)
15
Integrating structure-based approaches in generative molecular
M Thomas, A Bender, C de Graaf
Curr Opin Struct Biol
(2023)
79
Analysis of Virtual Control Groups and Inter-species Concordance using Preclinical Toxicity Data
P Wright
(2023)
In silico Prediction and Biological Assessment of Novel Angiogenesis Modulators from Traditional Chinese Medicine
Y Zhu, H Yang, L Han, LH Mervin, L Hosseini-Gerami, P Li, P Wright, M-A Trapotsi, K Liu, T-P Fan, A Bender
Front Pharmacol
(2023)
14
Using chemical and biological data to predict drug toxicity.
A Liu, S Seal, H Yang, A Bender
SLAS Discovery
(2023)
28
Using Transcriptomics and Cell Morphology Data in Drug Discovery: The Long Road to Practice
L-L Pruteanu, A Bender
ACS MEDICINAL CHEMISTRY LETTERS
(2023)
Prediction of inotropic effect based on calcium transients in human iPSC-derived cardiomyocytes and machine learning
H Yang, O Obrezanova, A Pointon, W Stebbeds, J Francis, KA Beattie, P Clements, JS Harvey, GF Smith, A Bender
Toxicology and Applied Pharmacology
(2022)
459
Statistical analysis of preclinical inter-species concordance of histopathological findings in the eTOX database.
PSR Wright, KA Briggs, R Thomas, GF Smith, G Maglennon, P Mikulskis, M Chapman, N Greene, BU Phillips, A Bender
Regulatory toxicology and pharmacology : RTP
(2022)
138
Retrospective analysis of the potential use of virtual control groups in preclinical toxicity assessment using the eTOX database
PSR Wright, GF Smith, KA Briggs, R Thomas, G Maglennon, P Mikulskis, M Chapman, N Greene, BU Phillips, A Bender
Regul Toxicol Pharmacol
(2022)
138
Augmented Hill-Climb increases reinforcement learning efficiency for language-based de novo molecule generation
M Thomas, NM O'Boyle, A Bender, C de Graaf
Journal of cheminformatics
(2022)
14
A review of biomedical datasets relating to drug discovery: a knowledge graph perspective
S Bonner, IP Barrett, C Ye, R Swiers, O Engkvist, A Bender, CT Hoyt, WL Hamilton
Brief Bioinform
(2022)
23
scRNA-Seq-based drug repurposing targeting idiopathic pulmonary fibrosis (IPF)
A Liu, J-H Lee, N Han, A Bender
(2022)
Using biological and chemical information to improve understanding of drug mechanism of action on the systems-level
L Hosseini.Gerami
(2022)
Using chemical and biological data and AI for predictive safety - fundamental concepts, new readouts, applications, limitations
A Bender
Toxicology Letters
(2022)
368
Using transcriptomic data to detect, understand, and treat injury in the context of drug toxicity and fibrotic disease
A Liu
(2022)
Identification of potential biomarker candidates of drug-induced vascular injury (DIVI) in rats using gene expression and histopathology data
A Liu, J Munoz-Muriedas, A Bender, D Dalmas
(2022)